BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033E05SP1|AL429752
(921 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig434 1034 0.0
3x_Contig618 384 e-106
>3x_Contig434
Length = 1553
Score = 1034 bits (520), Expect = 0.0
Identities = 523/524 (99%)
Strand = Plus / Minus
Query: 1 atcagctattaagatatgtgaacattcaacacaggaagacaacacatatattatgaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 atcagctattaagatatgtgaacattcaacacaggaagacaacacatatattatgaaaca 470
Query: 61 atacgacccaaaatattctgtagtgcattctcagcctcattggttgtcataacacttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 atacgacccaaaatattctgtagtgcattctcagcctcattggttgtcataacacttctt 410
Query: 121 catgtccagttggtaaacaaacacaaaccgagatattttgatccaccttgctacacctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 catgtccagttggtaaacaaacacaaaccgagatattttgatccaccttgctacacctcc 350
Query: 181 aaaacgcgaagtttcaaatttccttccctagcagcttaccttagttacgcgagttcagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aaaacgcgaagtttcaaatttccttccctagcagcttaccttagttacgcgagttcagtg 290
Query: 241 aaaaaaaatgcctacgtaataaaaattcttattgcaggaccagatctgaaacatatttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 aaaaaaaatgcctacgtaataaaaattcttattgcaggaccagatctgaaacatatttga 230
Query: 301 acggaatgcaataactgcacaaatagttcacggtatgaacgtttaacgtgttgtttgttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 acggaatgcaataactgcacaaatagttcacggtatgaacgtttaacgtgttgtttgttt 170
Query: 361 tgatattaggttatgttcatgtcggtatataagagcttcatctaattgggttcgtaattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tgatattaggttatgttcatgtcggtatataagagcttcatctaattgggttcgtaattt 110
Query: 421 ggtggttgagacaagatagatcagataactaacgctcattgaaccgattctaaaatagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ggtggttgagacaagatagatcagataactaacgctcattgaaccgattctaaaatagaa 50
Query: 481 gtcaatacaggaatagaaatacataccgagtgagatattatgtt 524
||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 49 gtcaatacaggcatagaaatacataccgagtgagatattatgtt 6
>3x_Contig618
Length = 1839
Score = 384 bits (193), Expect = e-106
Identities = 208/211 (98%), Gaps = 2/211 (0%)
Strand = Plus / Plus
Query: 711 taaaccggaaactggtgtaacaggaccatcgtcaatctcttataataagcaaagacagaa 770
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 taaaccggaaactggtgta-caggaccatcgtcaatctcttataataagcaaagacagaa 74
Query: 771 ttattctgtgctggg-gagcagcaatgacagtwatgcgtcttctcatggatcaatgtcat 829
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 75 ttattctgtgctgggtgagcagcaatgacagtaatgcgtcttctcatggatcaatgtcat 134
Query: 830 atatgggtaaagacactcacgagagcttaataaaacaaaatcgagtcaacagaaaaagaa 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 atatgggtaaagacactcacgagagcttaataaaacaaaatcgagtcaacagaaaaagaa 194
Query: 890 gtgaacattattacatttatgactttgaaaa 920
|||||||||||||||||||||||||||||||
Sbjct: 195 gtgaacattattacatttatgactttgaaaa 225
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6254
Number of Sequences: 1807
Number of extensions: 6254
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 2
length of query: 921
length of database: 10,358,551
effective HSP length: 16
effective length of query: 905
effective length of database: 10,329,639
effective search space: 9348323295
effective search space used: 9348323295
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)